Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Neural
Cell type
Cerebral Cortex
MeSH Description
Type of cerebral cortex which does not pass through a perinatal phase of six-layered structure as in the NEOCORTEX and develops into three or four layers in the mature brain. Allocortex has three subareas: archi- paleo- and periallo-cortex.

Attributes by original data submitter

Sample

strain
smc3 mutant
age
p7
dev_stage
postnatal 7days
sex
not determined
tissue
cerebral cortex

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
28570973
Reads aligned (%)
99.5
Duplicates removed (%)
23.2
Number of peaks
18578 (qval < 1E-05)

mm9

Number of total reads
28570973
Reads aligned (%)
99.4
Duplicates removed (%)
23.2
Number of peaks
18560 (qval < 1E-05)

Base call quality data from DBCLS SRA