Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic cortex
age
E17.5
strain
C57BL/6J
genotype/variation
BAF dcKO_hGFAP-Cre
chip antibody
H3K4me2 (Millipore 07-449)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
29782981
Reads aligned (%)
46.7
Duplicates removed (%)
90.5
Number of peaks
416 (qval < 1E-05)

mm9

Number of total reads
29782981
Reads aligned (%)
46.6
Duplicates removed (%)
90.7
Number of peaks
429 (qval < 1E-05)

Base call quality data from DBCLS SRA