Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Gonad

Cell type

Spermatocytes

MeSH Description

Male germ cells derived from SPERMATOGONIA. The euploid primary spermatocytes undergo MEIOSIS and give rise to the haploid secondary spermatocytes which in turn give rise to SPERMATIDS.

Sample

strain

CD1

collection_date

3/23/09

dev_stage

adult

sample_type

ChIP-seq H3K4me3

sex

male

tissue_type

pachytene spermatcyte

Sequenced DNA Library

library_name

pachy_K4

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

16920862

Reads aligned (%)

79.7

Duplicates removed (%)

22.1

Number of peaks

26733 (qval < 1E-05)

mm9

Number of total reads

16920862

Reads aligned (%)

79.4

Duplicates removed (%)

22.2

Number of peaks

26879 (qval < 1E-05)