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Install and launch IGV before selecting data to visualize
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Analyze
For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: ES cells
ATCC
MeSH
RIKEN BRC
SRX336235
Activated Erk1/2 Promotes Formation of Chromatin Features Inherent to Developmental Promoters in Mouse Embryonic Stem Cells-WT Erk2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA
Attributes by original data submitter
Sample
strain
ES Cells
cell_line
ES cells
genotype
wildtype
collection_date
2012-03-21
label
wildtype Erk2
geo_loc_name
USA: NYU
cell_type
ES cells
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 1000
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
21778932
Reads aligned (%)
91.7
Duplicates removed (%)
22.1
Number of peaks
1131 (qval < 1E-05)
mm9
Number of total reads
21778932
Reads aligned (%)
91.5
Duplicates removed (%)
22.2
Number of peaks
1152 (qval < 1E-05)
Base call quality data from
DBCLS SRA