Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
HFF-1
Primary Tissue
Unknown
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
purified DNA from the control fibroblasts
antibody
none
cell line
HFF1

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
116907549
Reads aligned (%)
98.7
Duplicates removed (%)
15.8
Number of peaks
2553 (qval < 1E-05)

hg19

Number of total reads
116907549
Reads aligned (%)
97.9
Duplicates removed (%)
17.6
Number of peaks
2145 (qval < 1E-05)

Base call quality data from DBCLS SRA