Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
Thyroid Gland
MeSH Description
A highly vascularized endocrine gland consisting of two lobes joined by a thin band of tissue with one lobe on each side of the TRACHEA. It secretes THYROID HORMONES from the follicular cells and CALCITONIN from the parafollicular cells thereby regulating METABOLISM and CALCIUM level in blood, respectively.

Attributes by original data submitter

Sample

sex
male
tissue
thyroid gland
lab
Michael Snyder, Stanford
sample_type
tissue
age
54 year
donor ID
ENCDO451RUA
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
33649844
Reads aligned (%)
98.0
Duplicates removed (%)
3.3
Number of peaks
1226 (qval < 1E-05)

hg19

Number of total reads
33649844
Reads aligned (%)
97.0
Duplicates removed (%)
3.3
Number of peaks
842 (qval < 1E-05)

Base call quality data from DBCLS SRA