Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Others
Cell type
Thyroid Gland
MeSH Description
A highly vascularized endocrine gland consisting of two lobes joined by a thin band of tissue with one lobe on each side of the TRACHEA. It secretes THYROID HORMONES from the follicular cells and CALCITONIN from the parafollicular cells thereby regulating METABOLISM and CALCIUM level in blood, respectively.

Attributes by original data submitter

Sample

sex
female
tissue
thyroid gland
lab
Michael Snyder, Stanford
sample_type
tissue
age
53 year
donor ID
ENCDO793LXB
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg38

Number of total reads
60760183
Reads aligned (%)
98.2
Duplicates removed (%)
21.3
Number of peaks
4857 (qval < 1E-05)

hg19

Number of total reads
60760183
Reads aligned (%)
97.5
Duplicates removed (%)
21.7
Number of peaks
3885 (qval < 1E-05)

Base call quality data from DBCLS SRA