Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Gonad

Cell type

Ovary

MeSH Description

The reproductive organ (GONADS) in female animals. In vertebrates, the ovary contains two functional parts: the OVARIAN FOLLICLE for the production of female germ cells (OOGENESIS); and the endocrine cells (GRANULOSA CELLS; THECA CELLS; and LUTEAL CELLS) for the production of ESTROGENS and PROGESTERONE.

Sample

sex

female

tissue

ovary

lab

Michael Snyder, Stanford

sample_type

tissue

age

51 year

donor ID

ENCDO271OUW

dev_stage

adult

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

not provided

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

38235107

Reads aligned (%)

97.1

Duplicates removed (%)

10.1

Number of peaks

21518 (qval < 1E-05)

hg19

Number of total reads

38235107

Reads aligned (%)

96.2

Duplicates removed (%)

10.3

Number of peaks

20308 (qval < 1E-05)