Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sex
male
cell line
RWPE1
lab
Michael Snyder, Stanford
sample_type
immortalized cell line
health state
normal
age
54 year
donor ID
ENCDO000ADM
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 4000

hg38

Number of total reads
72668989
Reads aligned (%)
95.0
Duplicates removed (%)
7.4
Number of peaks
1943 (qval < 1E-05)

hg19

Number of total reads
72668989
Reads aligned (%)
93.6
Duplicates removed (%)
7.7
Number of peaks
528 (qval < 1E-05)

Base call quality data from DBCLS SRA