Antigen

Antigen Class

TFs and others

Antigen

COPS2

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

sex

female

cell line

MCF-7

lab

Michael Snyder, Stanford

sample_type

immortalized cell line

health state

breast cancer (adenocarcinoma)

age

69 year

donor ID

ENCDO000AAE

dev_stage

adult

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

not provided

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

51430811

Reads aligned (%)

94.4

Duplicates removed (%)

28.3

Number of peaks

1495 (qval < 1E-05)

hg19

Number of total reads

51430811

Reads aligned (%)

93.5

Duplicates removed (%)

28.8

Number of peaks

425 (qval < 1E-05)