SRX3321944
GSM2825435: ChIP-seq from RWPE1 (ENCLB154ZKP); Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sex
male
cell line
RWPE1
lab
Michael Snyder, Stanford
sample_type
immortalized cell line
health state
normal
age
54 year
donor ID
ENCDO000ADM
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
not provided

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
86110062
Reads aligned (%)
96.2
Duplicates removed (%)
6.6
Number of peaks
47501 (qval < 1E-05)

hg19

Number of total reads
86110062
Reads aligned (%)
95.8
Duplicates removed (%)
6.6
Number of peaks
47386 (qval < 1E-05)

Base call quality data from DBCLS SRA