SRX3306733
GSM2826088: E7-myo-2-H3K27me3; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Uterus
Cell type
Pregnant uterus
NA
NA

Attributes by original data submitter

Sample

source_name
pregnant uterus, myometrium
strain
B6CBAF1/J
tissue/cell
whole myometrium from implantation sites
embryonic day
E7.5
ChIP
H3K27me3

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Histone-DNA complexes were immuoprecipitated from sonicated nuclei. Libraries were prepared using the Illumina TruSeq system and PCR amplification.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37868619
Reads aligned (%)
97.4
Duplicates removed (%)
11.4
Number of peaks
413 (qval < 1E-05)

mm9

Number of total reads
37868619
Reads aligned (%)
97.2
Duplicates removed (%)
11.4
Number of peaks
565 (qval < 1E-05)

Base call quality data from DBCLS SRA