Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Myod1

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12
strain
C3H
developmental stage
48hrs differentiating Myotubes
chip antibody
MyoD (C-20, Santa Cruz)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
89823373
Reads aligned (%)
78.3
Duplicates removed (%)
21.2
Number of peaks
27639 (qval < 1E-05)

mm9

Number of total reads
89823373
Reads aligned (%)
78.1
Duplicates removed (%)
21.2
Number of peaks
28412 (qval < 1E-05)

Base call quality data from DBCLS SRA