Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me2

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
w1118_ovary
genotype/variation
Wild type
age
adult stage 5-7 days old
tissue
ovary
chip antibody
H3K4me2 (Abcam, ab7766)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Drosophila DamID was carried out according to iDamIDseq based on a method from Gutierrez-Triana JA et al.2016 Libraries were prepared for sequencing using standard Illumina protocols

Sequencing Platform

instrument_model
Illumina HiSeq 2500

dm6

Number of total reads
20011622
Reads aligned (%)
98.9
Duplicates removed (%)
30.0
Number of peaks
8417 (qval < 1E-05)

dm3

Number of total reads
20011622
Reads aligned (%)
98.9
Duplicates removed (%)
29.6
Number of peaks
8587 (qval < 1E-05)

Base call quality data from DBCLS SRA