SRX3257470
GSM2806127: Input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Cardiovascular
Cell type
Heart
MeSH Description
The hollow, muscular organ that maintains the circulation of the blood.

Attributes by original data submitter

Sample

source_name
whole heart
pathology
Pooled heart
strain
C57BL/6
Sex
male

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP, Library construction and Illumina sequencing performed by Active Motif

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
28325553
Reads aligned (%)
98.3
Duplicates removed (%)
8.8
Number of peaks
420 (qval < 1E-05)

mm9

Number of total reads
28325553
Reads aligned (%)
98.2
Duplicates removed (%)
8.8
Number of peaks
390 (qval < 1E-05)

Base call quality data from DBCLS SRA