SRX3257469
GSM2806126: ANP32e ChIP-Seq TAC; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Anp32e

Cell type

Cell type Class
Cardiovascular
Cell type
Heart
MeSH Description
The hollow, muscular organ that maintains the circulation of the blood.

Attributes by original data submitter

Sample

source_name
whole heart
pathology
Hypertrophied heart
agent
12wk old
treatment
Transaortic coarctation (TAC) for 4days
strain
C57BL/6
antibody
anti-ANP32e (Abcam ab5993)
Sex
male

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP, Library construction and Illumina sequencing performed by Active Motif

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38624497
Reads aligned (%)
86.6
Duplicates removed (%)
36.4
Number of peaks
1103 (qval < 1E-05)

mm9

Number of total reads
38624497
Reads aligned (%)
86.5
Duplicates removed (%)
36.4
Number of peaks
1076 (qval < 1E-05)

Base call quality data from DBCLS SRA