SRX3242035
ChIP-seq of Saccharomyces cerevisiae:TBP AA-Rpb1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Yeast strain
Cell type
EKY28
NA
NA

Attributes by original data submitter

Sample

strain
EKY8
host
not applicable
isolation_source
not applicable
collection_date
2016-06
geo_loc_name
USA: New York
sample_type
cultured yeast
data type
ChIP-seq
paired end
No
ChIP-target
Rpb1
Rapamycin-target
TBP-AA

Sequenced DNA Library

library_name
TBP_AA-Rpb1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

sacCer3

Number of total reads
3187041
Reads aligned (%)
68.2
Duplicates removed (%)
20.9
Number of peaks
1007 (qval < 1E-05)

Base call quality data from DBCLS SRA