Antigen

Antigen Class

RNA polymerase

Antigen

RNA polymerase II

Cell type

Cell type Class

Gonad

Cell type

RMG-I

Primary Tissue

Ovary

Tissue Diagnosis

Carcinoma

Sample

source_name

RNAPII was profiled in RMG-1 clone in ARID1A-KD condition (doxyclicline inducible KD [72h])

cell line

RMG-1

chip antibody

Custom, rabbit polyclonal, raised against N terminus of RNAPII

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

NEBNext ChIP-Seq ULTRAII DNA Sample Prep Kit (New England Biolabs, inc.)

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

34115323

Reads aligned (%)

96.0

Duplicates removed (%)

5.6

Number of peaks

1739 (qval < 1E-05)

hg19

Number of total reads

34115323

Reads aligned (%)

95.3

Duplicates removed (%)

7.3

Number of peaks

1442 (qval < 1E-05)