SRX322540
GSM1186140: TALE-3XFlag rep 2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_TALE-3XFlag_ChIP
cell line
K562
cell type
erythrocytic leukaemia cells
transfected with
20ug TALE:3X Flag Plasmid
chip antibody
FLAG M2
chip antibody vendor
Sigma

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina MiSeq

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
2110924
Reads aligned (%)
75.4
Duplicates removed (%)
25.4
Number of peaks
56 (qval < 1E-05)

hg19

Number of total reads
2110924
Reads aligned (%)
74.7
Duplicates removed (%)
26.4
Number of peaks
86 (qval < 1E-05)

Base call quality data from DBCLS SRA