Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Muscle

Cell type

Tibialis anterior muscle

NA

NA

Sample

source_name

tibialis anterior muscle

tissue

tibialis anterior muscle

timepoint

14 days

chip antibody

H3 K4me1 (Abcam ab8895, lot GR127523-1)

treatment

control

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Frozen tissue thawed, homogenized, cells lysed Chromatin sheared and incubated overnight at 4C with antibodies using constant agitation; co-immunoprecipitated

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

31900805

Reads aligned (%)

53.3

Duplicates removed (%)

58.3

Number of peaks

117 (qval < 1E-05)

mm9

Number of total reads

31900805

Reads aligned (%)

53.2

Duplicates removed (%)

58.5

Number of peaks

132 (qval < 1E-05)