Antigen

Antigen Class

TFs and others

Antigen

Epitope tags

Cell type

Cell type Class

Muscle

Cell type

Tibialis anterior muscle

NA

NA

Sample

source_name

tibialis anterior muscle

tissue

tibialis anterior muscle

timepoint

24 hours

chip antibody

WCE - whole cell extract

treatment

control

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Frozen tissue thawed, homogenized, cells lysed Chromatin sheared and incubated overnight at 4C with antibodies using constant agitation; co-immunoprecipitated

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

7676301

Reads aligned (%)

47.0

Duplicates removed (%)

12.0

Number of peaks

242 (qval < 1E-05)

mm9

Number of total reads

7676301

Reads aligned (%)

46.9

Duplicates removed (%)

12.5

Number of peaks

269 (qval < 1E-05)