Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Larvae
Cell type
Eye discs
NA
NA

Attributes by original data submitter

Sample

source_name
Eye imaginal discs, chromatin IP against H3K4me1
genotype
wt
genetic background
Canton S
tissue
eye imaginal discs
developmental stage
third instar larvae
chip antibody
anti-H3K4me1 (Diagenode, catalog number CS-037-100)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
14473698
Reads aligned (%)
81.7
Duplicates removed (%)
16.3
Number of peaks
10817 (qval < 1E-05)

dm3

Number of total reads
14473698
Reads aligned (%)
82.0
Duplicates removed (%)
15.5
Number of peaks
11065 (qval < 1E-05)

Base call quality data from DBCLS SRA