Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Plasmablasts
NA
NA

Attributes by original data submitter

Sample

source_name
Plasmablasts
Sex
female
sorting markers
Thy1.1- F4/80- CD11c- CD138+ CD45.1- CD45.2+
organ
spleen
stimulation
LPS
ezh2 status
knockout

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18167210
Reads aligned (%)
97.5
Duplicates removed (%)
28.5
Number of peaks
21891 (qval < 1E-05)

mm9

Number of total reads
18167210
Reads aligned (%)
97.3
Duplicates removed (%)
28.7
Number of peaks
21851 (qval < 1E-05)

Base call quality data from DBCLS SRA