SRX312162
Pol III ChIP-seq in H1 hESCs

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC H1
NA
NA

Attributes by original data submitter

Sample

strain
H1 hESCs
label
H1_Rpc155
cell_type
hESC

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
36333327
Reads aligned (%)
98.4
Duplicates removed (%)
26.8
Number of peaks
1579 (qval < 1E-05)

hg19

Number of total reads
36333327
Reads aligned (%)
97.3
Duplicates removed (%)
28.6
Number of peaks
1590 (qval < 1E-05)

Base call quality data from DBCLS SRA