Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Others
Cell type
Tendons
MeSH Description
Fibrous bands or cords of CONNECTIVE TISSUE at the ends of SKELETAL MUSCLE FIBERS that serve to attach the MUSCLES to bones and other structures.

Attributes by original data submitter

Sample

source_name
tail tendon
tissue
tail tendon
strain
C57BL/6
genotype
WT
age
3-week-old
chip antibody
H3K27ac (Abcam, ab4729)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with H3K27ac antibody. Libraries were constructed using NEBNext Ultra II DNA Library Prep Kit(E7645) following manufacture instructions.

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
16219256
Reads aligned (%)
98.9
Duplicates removed (%)
2.2
Number of peaks
21464 (qval < 1E-05)

mm9

Number of total reads
16219256
Reads aligned (%)
98.8
Duplicates removed (%)
2.2
Number of peaks
21461 (qval < 1E-05)

Base call quality data from DBCLS SRA