Antigen

Antigen Class

TFs and others

Antigen

ESR1

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

MCF7_ER_CTCF

cell line

MCF7

cell type

mammary epithelial cells

experiment number

SLX-14429

chip antibody

ER (sc-543, Santa Cruz)

control antibody

CTCF (3418 XP, CST)

condition

none

spike-in cell line

None

spike-in organism

None

replicate

1

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

31892818

Reads aligned (%)

90.2

Duplicates removed (%)

50.2

Number of peaks

70878 (qval < 1E-05)

hg19

Number of total reads

31892818

Reads aligned (%)

89.7

Duplicates removed (%)

51.0

Number of peaks

69684 (qval < 1E-05)