SRX3100885
Lu-iPSC7 IgG ChipSeq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
iPSC derived cells
NA
NA

Attributes by original data submitter

Sample

isolate
not applicable
age
not applicable
biomaterial_provider
not applicable
sex
not applicable
tissue
not applicable
cell_line
Lu-iPSC7

Sequenced DNA Library

library_name
Lu-iPSC7_IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
152358748
Reads aligned (%)
14.1
Duplicates removed (%)
17.2
Number of peaks
11958 (qval < 1E-05)

hg19

Number of total reads
152358748
Reads aligned (%)
14.0
Duplicates removed (%)
18.6
Number of peaks
11751 (qval < 1E-05)

Base call quality data from DBCLS SRA