Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
wing discs
age
3rd instar-wandering
treatment
Hand Dissections
genotype
transgenic VK37(2L)22A3 insertion

Sequenced DNA Library

library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other
library_construction_protocol
Eye-antennal imaginal Disc were dissected from 3rd instar wandering larvae. The discs were immediately lysed and ATAC-seq was performed Tn5 and nextera library prep

Sequencing Platform

instrument_model
NextSeq 500

dm6

Number of total reads
12675106
Reads aligned (%)
61.4
Duplicates removed (%)
45.0
Number of peaks
10320 (qval < 1E-05)

dm3

Number of total reads
12675106
Reads aligned (%)
61.5
Duplicates removed (%)
44.1
Number of peaks
9988 (qval < 1E-05)

Base call quality data from DBCLS SRA