Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Gonad
Cell type
Spermatids
MeSH Description
Male germ cells derived from the haploid secondary SPERMATOCYTES. Without further division, spermatids undergo structural changes and give rise to SPERMATOZOA.

Attributes by original data submitter

Sample

strain
C57BL/6J
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
not applicable
dev_stage
not applicable
sex
male
tissue
Spermatids

Sequenced DNA Library

library_name
9231X4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
55725521
Reads aligned (%)
98.9
Duplicates removed (%)
11.8
Number of peaks
535 (qval < 1E-05)

mm9

Number of total reads
55725521
Reads aligned (%)
98.7
Duplicates removed (%)
11.7
Number of peaks
610 (qval < 1E-05)

Base call quality data from DBCLS SRA