Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Gonad
Cell type
Spermatocytes
MeSH Description
Male germ cells derived from SPERMATOGONIA. The euploid primary spermatocytes undergo MEIOSIS and give rise to the haploid secondary spermatocytes which in turn give rise to SPERMATIDS.

Attributes by original data submitter

Sample

strain
C57BL/6J
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
not applicable
dev_stage
not applicable
sex
male
tissue
Spermatocytes

Sequenced DNA Library

library_name
9231X2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
57624196
Reads aligned (%)
98.9
Duplicates removed (%)
12.5
Number of peaks
536 (qval < 1E-05)

mm9

Number of total reads
57624196
Reads aligned (%)
98.7
Duplicates removed (%)
12.5
Number of peaks
602 (qval < 1E-05)

Base call quality data from DBCLS SRA