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For sacCer3
BigWig
Peak-call (q < 1E-05)
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Peak-call (q < 1E-20)
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For sacCer3
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Unclassified
wikigenes
PDBj
CellType: Unclassified
ATCC
MeSH
RIKEN BRC
SRX3010347
GSM2705877: MCM6rtt105d G1 ChIP rep2; Saccharomyces cerevisiae; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Unclassified
Antigen
Unclassified
Cell type
Cell type Class
Unclassified
Cell type
Unclassified
NA
NA
Attributes by original data submitter
Sample
source_name
whole cell
genotype/variation
rtt105-del
cell cycle stage
G1 phase
release condition
none
chip protein
Mcm6-3HA
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
The HA-tagged protein-DNA were isolated with anti-HA antibody (12CA5, Roche, Cat. No. 11 583 816 001). Libraries were prepared according to NEBNext® Ultra™ DNA Library Prep Kit for Illumina® (E7370).
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
5938679
Reads aligned (%)
18.0
Duplicates removed (%)
8.0
Number of peaks
531 (qval < 1E-05)
Base call quality data from
DBCLS SRA