Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
Adrenal Glands
MeSH Description
A pair of glands located at the cranial pole of each of the two KIDNEYS. Each adrenal gland is composed of two distinct endocrine tissues with separate embryonic origins, the ADRENAL CORTEX producing STEROIDS and the ADRENAL MEDULLA producing NEUROTRANSMITTERS.

Attributes by original data submitter

Sample

dev_stage
adult
tissue
adrenal gland
sample_type
tissue
lab
Bradley Bernstein, Broad
age
53 year
donor ID
ENCDO793LXB
sex
female

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
general protocol: https://www.encodeproject.org/documents/69af4be8-3a50-4819-9642-ffb6db747469/@@download/attachment/whole_cell_extract_library_construction_v1.0.pdf general protocol: https://www.encodeproject.org/documents/69af4be8-3a50-4819-9642-ffb6db747469/@@download/attachment/whole_cell_extract_library_construction_v1.0.pdf

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
53145694
Reads aligned (%)
98.1
Duplicates removed (%)
5.1
Number of peaks
1435 (qval < 1E-05)

hg19

Number of total reads
53145694
Reads aligned (%)
97.0
Duplicates removed (%)
6.3
Number of peaks
1118 (qval < 1E-05)

Base call quality data from DBCLS SRA