Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Others
Cell type
Adrenal Glands
MeSH Description
A pair of glands located at the cranial pole of each of the two KIDNEYS. Each adrenal gland is composed of two distinct endocrine tissues with separate embryonic origins, the ADRENAL CORTEX producing STEROIDS and the ADRENAL MEDULLA producing NEUROTRANSMITTERS.

Attributes by original data submitter

Sample

MOLECULE
genomic DNA
DISEASE
None
BIOMATERIAL_PROVIDER
University of Washington, Congenital Defects Lab. Ian Glass
BIOMATERIAL_TYPE
Primary Tissue
TISSUE_TYPE
Fetal Adrenal Gland
TISSUE_DEPOT
UW
COLLECTION_METHOD
fetal
DONOR_ID
H-24800
DONOR_AGE
day 97
DONOR_HEALTH_STATUS
NA
DONOR_SEX
Male
DONOR_ETHNICITY
NA
sample_term_id
UBERON_0002369

Sequenced DNA Library

library_name
Histone.DS23304
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Single read - Illumina

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
25142236
Reads aligned (%)
92.0
Duplicates removed (%)
4.5
Number of peaks
43362 (qval < 1E-05)

hg19

Number of total reads
25142236
Reads aligned (%)
91.6
Duplicates removed (%)
4.9
Number of peaks
43275 (qval < 1E-05)

Base call quality data from DBCLS SRA