SRX2982446
ChIP-seq of GFP-nls in WT ovary

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
vasP-GFP-nls
age
2-4 days
sex
female
tissue
ovary
sample_type
DNA
custom name
GFP ChIP for vasP-GFP-nls ovary

Sequenced DNA Library

library_name
ChIP-seq of GFP-nls in WT ovary
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
13445880
Reads aligned (%)
94.1
Duplicates removed (%)
12.9
Number of peaks
825 (qval < 1E-05)

dm3

Number of total reads
13445880
Reads aligned (%)
94.4
Duplicates removed (%)
12.4
Number of peaks
347 (qval < 1E-05)

Base call quality data from DBCLS SRA