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For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For ce11
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For ce10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Unclassified
wikigenes
PDBj
CellType: Mixed embryo
ATCC
MeSH
RIKEN BRC
SRX2958248
GSM2685184: dpy-21(y607) (ChIP); Caenorhabditis elegans; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Unclassified
Antigen
Unclassified
Cell type
Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA
Attributes by original data submitter
Sample
source_name
mixed stage embryos
strain
dpy-21(y607)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
The embryo extract was prepared and the immunoprecipitation was perfromed as in Kruesi et al. (2013). For each sample, 6 μg of H4K20me1 antibody was used for 2 mg embryo extract. The library construction was performed as in Kruesi et al. (2013).
Sequencing Platform
instrument_model
Illumina HiSeq 4000
Where can I get the processing logs?
Read processing pipeline
log
ce11
Number of total reads
135691956
Reads aligned (%)
89.9
Duplicates removed (%)
39.3
Number of peaks
0 (qval < 1E-05)
ce10
Number of total reads
135691956
Reads aligned (%)
89.9
Duplicates removed (%)
39.3
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA