Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

strain
C57BL/6J
age
7 - 14 weeks
sex
female
tissue
liver
sample_type
tissue sample

Sequenced DNA Library

library_name
BL6-1-CENPA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

mm10

Number of total reads
12995069
Reads aligned (%)
95.6
Duplicates removed (%)
6.4
Number of peaks
68 (qval < 1E-05)

mm9

Number of total reads
12995069
Reads aligned (%)
95.6
Duplicates removed (%)
6.4
Number of peaks
63 (qval < 1E-05)

Base call quality data from DBCLS SRA