Antigen

Antigen Class

Histone

Antigen

H3K9ac

Cell type

Cell type Class

Unclassified

Cell type

Unclassified

NA

NA

Sample

source_name

Cell Culture

cell line or tissue

LAN6

cell or tissue type

ATRX wild-type metastatic neuroblastoma

treated with

none (untreated)

chip antibody

H3K9ac (Abcam, ab10812)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Native ChIP as previously described (Valle-Garcia et al., 2016). Library prepared as previously described (Valle-Garcia et al., 2016).

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

42500610

Reads aligned (%)

100.0

Duplicates removed (%)

4.6

Number of peaks

131 (qval < 1E-05)

hg19

Number of total reads

42500610

Reads aligned (%)

100.0

Duplicates removed (%)

4.7

Number of peaks

146 (qval < 1E-05)