Antigen

Antigen Class

TFs and others

Antigen

Lmo2

Cell type

Cell type Class

Pluripotent stem cell

Cell type

mESC derived mesodermal cells

NA

NA

Sample

source_name

Flk-1+ cells

cell type

ES cell derived Flk-1+ cells

genotype

Lmo2-/-

chip antibody

LMO2 (R&D systems AF2726)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

RNA extraction using collumns; AmPure beads for the ChIP-Seq; Qiagen MinElute for the DHS-seq According to Illumina Sample Preparation Kit

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

19940258

Reads aligned (%)

88.1

Duplicates removed (%)

83.5

Number of peaks

200 (qval < 1E-05)

mm9

Number of total reads

19940258

Reads aligned (%)

88.0

Duplicates removed (%)

83.6

Number of peaks

172 (qval < 1E-05)