Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HP1b

Cell type

Cell type Class
Embryo
Cell type
14-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
HP1b Q4114 14-16 hr OR Emb ChIP expt.2031
strain
Oregon-R(official name : Oregon-R-modENCODE genotype : wild type )
developmental stage
Embryo 14-16hr OR
genotype
wild type

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
17632928
Reads aligned (%)
93.0
Duplicates removed (%)
15.0
Number of peaks
4098 (qval < 1E-05)

dm3

Number of total reads
17632928
Reads aligned (%)
93.8
Duplicates removed (%)
11.9
Number of peaks
3786 (qval < 1E-05)

Base call quality data from DBCLS SRA