Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Kmt2d

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic stem cell
cell type
embryonic stem cell
cell line
v6.5
genotype/variation
Mll4 NT deletion/Mll4dNT
chip antibody
Mll4 (Homemade, #825)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
46434800
Reads aligned (%)
97.9
Duplicates removed (%)
25.3
Number of peaks
13918 (qval < 1E-05)

mm9

Number of total reads
46434800
Reads aligned (%)
97.7
Duplicates removed (%)
25.3
Number of peaks
14185 (qval < 1E-05)

Base call quality data from DBCLS SRA