Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

isolate

purchase

age

no

biomaterial_provider

cell resource center of Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences

sex

not collected

tissue

liver

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

5‒10 ng of immunoprecipitated DNA were prepared ChIP-Seq libraries. ChIP-Seq libraries were prepared with the NEBNext Ultra DNA Library Prep Kit for Illumina and NEBNext Multiplex Oligos for Illumina (Set 2) (New England Biolabs).

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

25778713

Reads aligned (%)

81.9

Duplicates removed (%)

0.8

Number of peaks

825 (qval < 1E-05)

hg19

Number of total reads

25778713

Reads aligned (%)

81.1

Duplicates removed (%)

1.2

Number of peaks

419 (qval < 1E-05)