Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Blood

Cell type

Natural Killer T-Cells

MeSH Description

A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Sample

source_name

ATAC_NKT_rep2

strain

C57BL/6

tissue

Thymus

cell type

NKT

antibodies

None

Sequenced DNA Library

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

library_construction_protocol

Illumina Nextra DNA prep kit (Part# FC-121-1030)

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

66489556

Reads aligned (%)

95.2

Duplicates removed (%)

69.0

Number of peaks

44077 (qval < 1E-05)

mm9

Number of total reads

66489556

Reads aligned (%)

95.2

Duplicates removed (%)

69.0

Number of peaks

44071 (qval < 1E-05)