SRX278072
Illumina chromatin immunoprecipitates sequencing of genomic DNA library 'Solexa-1512' containing sample BROAD:SEQUENCING SAMPLE:16471.0

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Sample name
BROAD:SEQUENCING_SAMPLE:16471.0
geographic location (country and/or sea,region)
missing
isolation source
C-H3K36
strain
N2
BioSampleModel
Generic

Sequenced DNA Library

library_name
Solexa-1512
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5006589
Reads aligned (%)
3.3
Duplicates removed (%)
33.9
Number of peaks
505 (qval < 1E-05)

ce10

Number of total reads
5006589
Reads aligned (%)
3.3
Duplicates removed (%)
33.9
Number of peaks
506 (qval < 1E-05)

Base call quality data from DBCLS SRA