SRX278067
Illumina chromatin immunoprecipitates sequencing of genomic DNA library 'Solexa-1529' containing sample BROAD:SEQUENCING SAMPLE:16576.0

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

Sample name
BROAD:SEQUENCING_SAMPLE:16576.0
geographic location (country and/or sea,region)
missing
isolation source
C-input
strain
N2
BioSampleModel
Generic

Sequenced DNA Library

library_name
Solexa-1529
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5031238
Reads aligned (%)
1.3
Duplicates removed (%)
21.5
Number of peaks
28 (qval < 1E-05)

ce10

Number of total reads
5031238
Reads aligned (%)
1.3
Duplicates removed (%)
21.4
Number of peaks
28 (qval < 1E-05)

Base call quality data from DBCLS SRA