Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Neural
Cell type
Glioblastoma stem-like cells
NA
NA

Attributes by original data submitter

Sample

source_name
glioblastoma surgical resection
cell type
glioblastoma stem-like cells, transduced with miR-302-368
tumor stage
human glioblastoma multiformis
chip antibody
H3K27me3 (Millipore, 07-449)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
200225178
Reads aligned (%)
95.3
Duplicates removed (%)
26.7
Number of peaks
5736 (qval < 1E-05)

hg19

Number of total reads
200225178
Reads aligned (%)
94.3
Duplicates removed (%)
28.6
Number of peaks
4289 (qval < 1E-05)

Base call quality data from DBCLS SRA