Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Embryo
Cell type
8-cell stage
NA
NA

Attributes by original data submitter

Sample

source_name
mouse embryo
tissue
8-cell embryo
chip antibody
H3K9me3
strain
B6D2F1 (C57BL/6 x DB/2)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
17167176
Reads aligned (%)
97.9
Duplicates removed (%)
18.4
Number of peaks
221 (qval < 1E-05)

mm9

Number of total reads
17167176
Reads aligned (%)
97.8
Duplicates removed (%)
18.5
Number of peaks
195 (qval < 1E-05)

Base call quality data from DBCLS SRA