Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

strain

C57BL6J

age

8 weeks

sex

pooled male and female

tissue

Th17

replicate

biological replicate 1

genotype

RORgtM

sample_type

ChIP

Sequenced DNA Library

library_name

S7999

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

51979253

Reads aligned (%)

96.4

Duplicates removed (%)

15.2

Number of peaks

696 (qval < 1E-05)

mm9

Number of total reads

51979253

Reads aligned (%)

96.2

Duplicates removed (%)

15.1

Number of peaks

750 (qval < 1E-05)