Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RBPJ

Cell type

Cell type Class
Blood
Cell type
Mino
Tissue
Peripheral Blood/Mantle Cell Lymphoma (B Cell Non-Hodgkin's Lymphoma)
Cell Type
Lymphoblast
Disease
Mantle Cell Lymphoma

Attributes by original data submitter

Sample

source_name
Mino cell line
cell line
Mino
cell type
Mantle cell lymphoma cell line
drug treatment
DMSO
other treatment
Notch ligand (DLL1-IgG)
chip antibody
RBPJ (Cell Signaling, catalog #5313)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
37713359
Reads aligned (%)
94.9
Duplicates removed (%)
2.6
Number of peaks
743 (qval < 1E-05)

hg19

Number of total reads
37713359
Reads aligned (%)
94.1
Duplicates removed (%)
2.8
Number of peaks
725 (qval < 1E-05)

Base call quality data from DBCLS SRA