Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
MV4;11 cell line
tissue
peripheral blood
cell line
MV4;11
clickable molecule
JQ1–PA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysate were isolated from formaldehybe cross-linked cells and sonicated to release the chromatin, then chem-precipitation was performed with pre-clicked JQ1 biotin conjugated beads ThruPLEXTM-FD Prep Kit protocol (Rubicon Genomics)

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
6123354
Reads aligned (%)
85.7
Duplicates removed (%)
37.1
Number of peaks
9250 (qval < 1E-05)

hg19

Number of total reads
6123354
Reads aligned (%)
85.4
Duplicates removed (%)
37.5
Number of peaks
9234 (qval < 1E-05)

Base call quality data from DBCLS SRA