Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Lung

Cell type

Lung

MeSH Description

Either of the pair of organs occupying the cavity of the thorax that effect the aeration of the blood.

Sample

source_name

Lung

flow_cell

42334353

Sex

male

strain

C57BL6/6JRj

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

DNA isolation was performed using standard phenol chloroform methods. Bisulfite padlock probes were designed using the ppDesigner 2.0 software (22306810) for mouse chromosome 7 (mm10). The probe and library preparation was performed based on previously published protocol (ibid).

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

214187

Reads aligned (%)

100.0

Coverage rate (×)

0.0

Number of hyper MRs

297 (qval < 1E-05)

mm9

Number of total reads

214187

Reads aligned (%)

100.0

Coverage rate (×)

0.0

Number of hyper MRs

297 (qval < 1E-05)